Article: CMT: a constrained multi-level thresholding approach for ChIP-Seq data analysis.
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Article Data (extracted)
Rezaeian I; Rueda L
PLoS ONE, 2014
10.1371/journal.pone.0093873.t002
Percentage of common peaks detected by each method included in the comparison and related to each protein of interest.
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|
|
CMT |
T-PIC |
MACS |
| FoxA1 |
CMT |
100 |
79.8 |
50.8 |
|
T-PIC |
96.7 |
100 |
59.8 |
|
MACS |
95.1 |
92.3 |
100 |
| CAD |
CMT |
100 |
41.9 |
24.4 |
|
T-PIC |
72.7 |
100 |
47.3 |
|
MACS |
79.0 |
88.4 |
100 |
| GT |
CMT |
100 |
66.1 |
16.9 |
|
T-PIC |
70.1 |
100 |
18.0 |
|
MACS |
68.9 |
69.0 |
100 |
| HB1 |
CMT |
100 |
82.9 |
93.1 |
|
T-PIC |
74.0 |
100 |
97.8 |
|
MACS |
66.1 |
77.7 |
100 |
| HB2 |
CMT |
100 |
85.3 |
64.2 |
|
T-PIC |
73.4 |
100 |
55.6 |
|
MACS |
66.7 |
67.1 |
100 |
| KR1 |
CMT |
100 |
54.0 |
28.2 |
|
T-PIC |
73.6 |
100 |
44.7 |
|
MACS |
76.4 |
88.7 |
100 |
| KR2 |
CMT |
100 |
54.5 |
34.4 |
|
T-PIC |
74.2 |
100 |
54.8 |
|
MACS |
76.7 |
89.6 |
100 |
| H3K4ac |
CMT |
100 |
16.1 |
N/A |
|
T-PIC |
16.7 |
100 |
N/A |
|
MACS |
N/A |
N/A |
N/A |
Inferred neuron-electrophysiology data values
| Neuron Type |
Neuron Description |
Ephys Prop |
Extracted Value |
Standardized Value |
Content Source |
