Article: CMT: a constrained multi-level thresholding approach for ChIP-Seq data analysis.
Full Text (publisher's website) ; Article Metadata ; Article Data (extracted) Rezaeian I; Rueda L PLoS ONE, 2014
Dataset | Method of Comparison | CMT | T-PIC | MACS |
FoxA1 | Mean length of peaks | 277 | 303 | 373 |
Enrichment ratio | 2.39 | 2.42 | 1.83 | |
CAD | Mean length of peaks | 476 | 818 | 507 |
Enrichment ratio | 0.92 | 0.88 | 0.93 | |
GT | Mean length of peaks | 303 | 866 | 194 |
Enrichment ratio | 4.21 | 1.98 | 3.02 | |
HB1 | Mean length of peaks | 365 | 920 | 429 |
Enrichment ratio | 2.03 | 1.57 | 1.80 | |
HB2 | Mean length of peaks | 343 | 891 | 228 |
Enrichment ratio | 2.11 | 1.56 | 1.99 | |
KR1 | Mean length of peaks | 517 | 728 | 492 |
Enrichment ratio | 1.91 | 1.83 | 1.95 | |
KR2 | Mean length of peaks | 513 | 737 | 500 |
Enrichment ratio | 1.94 | 1.75 | 2.10 |
Comparison between CMT, MACS and T-PIC based on the number and mean length of detected peaks and enrichment score.
Inferred neuron-electrophysiology data values
Neuron Type | Neuron Description | Ephys Prop | Extracted Value | Standardized Value | Content Source |
---|